Identification of QTLs for cold tolerance at seedling stage in rice (Oryza sativa L.)
Keywords:
Rice (Oryza sativa L.), seedling stage, cold tolerance, QTLs
Abstract
Rice is a cold sensitive plant. During off-season cultivation this crop experiences cold at seedling stage. The present study was based on 122 RILs in F13 generation developed by single-seed descent method from a cross between two indica cultivars Danteshwari and Dagad deshi. Screening was conducted during December 2012-January 2013 with seven replications at seedling stage. The genotypes exhibited marked variation for cold tolerance, with an average of 3.52 score on 1-9 scale and 0.62 broad sense heritability. Genotypic data of this population was developed using 161 SSR markers. A total of 5 QTLs were identified on chromosome 1, 3, 6, 9 and 12. QTL present on chromosome 9 had major effect with LOD value of 9.53 and located between HvSSR 9-7 to HvSSR 9-19. These QTLs will be helpful to facilitate the development of novel cold tolerant cultivars using molecular breeding.
Published
2014-02-25
Section
Research Article
Copyright (c) 2014 Indian Journal of Genetics and Plant Breeding
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